Published: Oct. 15, 2020 By

Xiaoyun Ding
Above: Assistant Professor听Xiaoyun Ding in the Biomedical Microfluidics Lab.听
Top:听Acousto Thermal Shift Assay devices being assembled.

Diseases of the blood, like sickle cell disease, have traditionally taken a full day, tedious lab work and expensive equipment to diagnose, but researchers at the 麻豆影院 and the University of Colorado Anschutz have developed a way to diagnose these conditions with greater sensitivity and precision in only one minute. Their technology is smaller than a quarter and requires only a small droplet of blood to assess protein interactions, dysfunction or mutations.

Assistant Professor Xiaoyun Ding of the Paul M. Rady Department of Mechanical Engineering and Associate Professor Michael Stowell of the Department of Molecular, Cellular and Developmental Biology at CU 麻豆影院, along with of the Departments of Biochemistry and Molecular Genetics and Medicine, Division of Hematology at CU Anschutz, co-authored a 听听

This project began when Ding realized that a technology developed in his lab could increase the speed of cell protein analysis performed by Stowell and his research group. As Stowell and D鈥橝lessandro got involved, new applications emerged, including disease diagnosis.

鈥淚n Africa, sickle cell disease is the cause of death in 5% of children under 5 years old for lack of early diagnosis,鈥 said D鈥橝lessandro. 鈥淭his common, life鈥恡hreatening genetic disorder is most prevalent in poor regions of the world where newborn screening and diagnosis are rare.鈥

Sickle cell disease affects hemoglobin, the molecule in red blood cells that delivers oxygen to cells throughout the body. In some areas of the world where malaria is endemic, variants of hemoglobin have evolved that can cause red blood cells to assume a crescent, or sickle, shape.

鈥淎lmost all life activities involve proteins,鈥 said Ding. 鈥淲e thought if we could measure the protein thermal stability change, we could detect these diseases that affect protein stability.鈥

Proteins have a specific solubility at a specific temperature. When one bonds to another or when the protein is mutated, the solubility changes. By measuring solubility at different temperatures, researchers can tell whether the protein has been mutating.

ATSA device
A completed Acousto Thermal Shift Assay device shown next to a quarter for size comparison. This tiny听lab-on-a-chip device听can听detect protein thermal stability change to听diagnose sickle cell disease听in one minute.听

Before recent developments, Stowell and his group, including researcher Kerri Ball, used Thermal Shift Assays to assess protein stability under varying conditions. Now, with the new technology, an Acousto Thermal Shift Assay, they can do the same but faster and with greater sensitivity.

The ATSA utilizes high-amplitude sound waves, or ultrasound, to heat a protein sample while concentrating the proteins that don鈥檛 dissolve. Device components include a channel where the sample is deposited and two electrodes on each side to generate the wave that applies acoustic heating and concentration.

For both a traditional TSA and ATSA, samples are collected and heated from 40 to 70 degrees Celsius. The traditional TSA measures how much of the protein has dissolved at set points over the course of the temperature increase, while the ATSA measures data continuously, recording how much of the protein has dissolved at every fraction of change in degrees Celsius.

鈥淥ur method is seven to 34 times more sensitive,鈥 said Ding. 鈥淭he ATSA can distinguish the sickle cell protein from normal protein, while the traditional TSA method cannot.鈥

Another benefit of the ATSA is cost reduction in terms of human labor and equipment.

鈥淭he traditional methods for thermal profiling require specialized equipment such as calorimeters, polymerase chain reaction machines, and plate readers that require at least some technical expertise to operate,鈥 said Ball. 鈥淭hese instruments are also not very portable, requiring samples to be transported to the instruments for analysis.鈥

Ball said the ATSA requires only a power source, a microscope and a camera as simple as the one on your smart phone. Because the protein is concentrated, there is also no need to apply a florescent dye as is sometimes required to highlight protein changes in a traditional TSA.

Ding said it is thanks to his collaborators, experts in biochemistry and hematology, that they now know the full impact of the technology.

鈥淭his technique is an exciting development, because it represents a new and promising point-of-care platform for a rapid and highly sensitive diagnostic tool of sickle cell disease, and maybe for other hemoglobinopathies such as beta thalassemia too,鈥 said D鈥橝lessandro.

By working with the engineering team, Ball said she and her research听group created tools to accomplish their goals in new and better ways.