Publications

Publications from the Chuong lab. Lab member names in bold. Asterisk (*) marks equal contributions. For a complete and updated list of publications, please see the 

Preprints


  1. Pasquesi GIM, Allen H, Ivancevic A, Barbachano-Guerrero A, Joyner O, Guo K, Simpson DM, Gapin K, Horton I, Nguyen L, Yang Q, Warren CJ, Florea LD, Bitler BG, Santiago ML, Sawyer SL, Chuong EB
    bioRxiv 2023


  2. Nguyen LL, Watson ZL, Ortega R, Woodruff ER, Jordan KR, Iwanaga R, Yamamoto TM, Bailey CA, Jeong AD, Guntupalli SR, Behbakht K, Gbaja V, Arnoult N, Chuong EB*, Bitler B*
    bioRxiv 2023

Published research articles


  1. Ivancevic A, Simpson DM, Joyner OM, Bagby SM, Nguyen LL, Bitler BG, Pitts TM, Chuong EB​
    Science Advances 2024

  2. Dziulko AK, Allen H, Chuong EB
    Human Molecular Genetics 2024

  3. Nguyen LL^, Watson ZL^, Ortega R, Woodruff ER, Jordan KR, Iwanaga R, Yamamoto TM, Bailey CA, To F, Jeong AD, Guntupalli SR, Behbakht K, Gibaja V, Arnoult N, Cocozaki A, Chuong EB*, Bitler BG*
    Molecular Cancer Therapeutics 2024

  4. Buttler CA, Ramirez D, Dowell RD, Chuong EB
    Mobile DNA 2023

  5. Ramirez D, Chuong EB, Dowell RD
    BMC Research Notes 2023

  6. Horton I*, Kelly CJ*, Dziulko A, Simpson DM, Chuong EB
    eLIFE 2023

  7. McMellen A, Yamamoto TM, Qamar L, Sanders BE, Nguyen LL, Ortiz Chavez D, Bapat J, Berning A, Post MD, Johnson J, Behbakht K, Nurmemmedov E, Chuong EB, Bitler BG
    Molecular Cancer Research 2023 

  8. Kelly CJ, Chitko-McKown C, Chuong EB
    Genome Research 2022

  9. Pasquesi GIM, Kelly CJ, Ordonez AD, Chuong EB
    Mobile DNA 2022

  10. Raviram R, Rocha PP, Luo VM, Swanzey E, Miraldi ER, Chuong EB, Feschotte C, Bonneau R, Skok JA
    Genome Biology (2018)

  11. Guernsey MW, Chuong EB, Cornelis G, Renfree MB*, Baker JC*
    eLIFE (2017)

  12. Yu Y, Yarrington RM, Chuong EB, Elde NC, Stillman DJ
    PNAS (2016)

  13. Chuong EB, Elde NC*, Feschotte C*
    Science (2016)

  14. Hannibal RL, Chuong EB, Mulia JR, Gilbert DM, Valouev A, Baker JC
    PLOS Genetics (2014)

  15. Wills AE, Gupta R, Chuong EB, Baker JC
    Methods (2014)

  16. Chuong EB, Rumi MA, Soares MJ, Baker JC
    Nature Genetics (2013)

  17. Yoon SJ, Wills AE, Chuong EB, Gupta R, Baker JC
    Genes and Development (2011)

  18. Kim SW*, Yoon SJ*, Chuong EB*, Oyolu CB, Wills AE, Gupta R, Baker JC
    Developmental Biology (2011) 

  19. Chuong EB, Tong W, Hoekstra HE
    Molecular Biology and Evolution (2010)

  20. Turner LM, Chuong EB, Hoekstra HE
    Genetics (2008)*equal contribution

Reviews and Commentaries


  1. Buttler CA, Chuong EB
    Immunological Reviews (2021)

  2. Ivancevic A, Chuong EB
    PNAS (2020)

  3. Chuong EB
    PLOS Biology (2018)

  4. Chuong EB, Elde NC, Feschotte C.
    Nature Reviews Genetics (2016)
  5. Perspective: 
    Chuong EB, Feschotte C.
    Science (2013)

  6. Chuong EB, Hannibal RL, Green SL, Baker JC
    Applied & Translational Genomics (2013)
  7.  
    Chuong EB
    Bioessays (2013) highlighted article